BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F05LP1|AL424995
(954 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig380 1797 0.0
>3x_Contig380
Length = 1539
Score = 1797 bits (895), Expect = 0.0
Identities = 935/956 (97%), Gaps = 3/956 (0%)
Strand = Plus / Plus
Query: 1 aagnattccccaatggattaattccgcttgacgacgtcgacccggcatttgtaaaggtat 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaattccccaatggattaattccgcttgacgacgtcgacccggcatttgtaaaggtat 380
Query: 61 ctggtcttttggtaaccacaaatttcgtatcaggaaaatacyccttattattgggatgtg 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ctggtcttttggtaaccacaaatttcgtatcaggaaaatactccttattattgggatgtg 440
Query: 121 gggttaacgtaacgaacgamgctccaacgacttccttggcgacatgggtcaaaatcttga 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggttaacgtaacgaacgaagctccaacgacttccttggcgacatgggtcaaaatcttga 500
Query: 181 ataatgaaagagatgctttaggaatgccgcacttaccgccaattgatcatgaaatacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataatgaaagagatgctttaggaatgccgcacttaccgccaattgatcatgaaatacttc 560
Query: 241 tagcgaagtatctcaacgaacttgatactttgttgaaaammttcttgatgtacggaccat 300
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 tagcgaagtatctcaacgaacttgatactttgttgaaaaaattcttgatgtacggaccat 620
Query: 301 ctccaatcttgcccgagtactataaatactggatgcattccgaccaaattgtacaactat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctccaatcttgcccgagtactataaatactggatgcattccgaccaaattgtacaactat 680
Query: 361 tggaccataactctgtcagagcaaaacttgttggaatcaccgaagattacggcttattga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggaccataactctgtcagagcaaaacttgttggaatcaccgaagattacggcttattga 740
Query: 421 ttgccaaggagttgattgctggaagtaatactcatttcaccggaaatgtttatcatctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgccaaggagttgattgctggaagtaatactcatttcaccggaaatgtttatcatctgc 800
Query: 481 maccagatggcaatacgtttgacattttcaaaggcttgatatctaamammgcctgamagc 540
||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||
Sbjct: 801 aaccagatggcaatacgtttgacattttcaaaggcttgatatctaaaaaagcctgaaagc 860
Query: 541 catatatatyacttatttmgccttatagtaccctacagttacagtcaatataatgtggat 600
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 catatatattacttatttagccttatagtaccctacagttacagtcaatataatgtggat 920
Query: 601 tgtgcattaaattacgaaccttaamamaggtagatataaaactatactaaaatacaaggt 660
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 921 tgtgcattaaattacgaaccttaaaaaaggtagatataaaactatactaaaatacaaggt 980
Query: 661 ctgaagatgttcgtctctaaagctttatcgtgaaattttaaattccagaatagaatgaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 ctgaagatgttcgtctctaaagctttatcgtgaaattttaaattccagaatagaatgaag 1040
Query: 721 ttcattaatatgttaatgataatctgctgcaattcgcagaaaacaytaattattctcctg 780
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1041 ttcattaatatgttaatgataatctgctgcaattcgcagaaaaca-taattattctcctg 1099
Query: 781 ctcacttattttctttcttctcttcgtctgattcttgttgcttaggttcagctggagaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 ctcacttattttctttcttctcttcgtctgattcttgttgcttaggttcagctggagaat 1159
Query: 841 aagaacmaggamtgtattgtggtgaggttggtgagtragatggagaagtaggggaatagg 900
|||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1160 aagaaccaggactgtattgtggtgaggttggtgagtaagatggagaagtaggggaatagg 1219
Query: 901 atggtgaggtgggggaataggatggcgatgttggag-ataggaa-gtgragtggga 954
|||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||
Sbjct: 1220 atggtgaggtgggggaataggatggcgatgttggagaataggaaggtgaagtggga 1275
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5942
Number of Sequences: 1807
Number of extensions: 5942
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 954
length of database: 10,358,551
effective HSP length: 16
effective length of query: 938
effective length of database: 10,329,639
effective search space: 9689201382
effective search space used: 9689201382
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)